Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869144.1_cds_XP_016433662.1_29799
CDS Infomation

[gene=LOC107760163] [db_xref=GeneID:107760163] [protein=pescadillo homolog] [protein_id=XP_016433662.1] [location=join(44408..44431,44573..44658,45181..45429,45523..45648,45733..45817,45902..46012,46604..46697,46770..47050,47837..47944,50298..50419,50523..50742,51021..51239,51723..51809)] [gbkey=CDS]
Sequence

ATGCCGAAGCATTACAGGCCTGCTGGAAAGAAAAAGGAAGGAAATGCAGCAAGATATATT
ACAAAATCACAAGCTGTGAAATACCTTCAAGTCAGTTTATCACTCTTCAGGAAGCTATGC
ATCTTGAAAGGTATTTTCCCCCGTGAACCAAAGAAGAAGGTTAAGGGAAACCACCGTACC
TACTATCACACAAAAGATATTTTGTTCCTTAAACATGAGCCCCTACTCGAGAAGTTCAGA
GAAATGCGAGCATACGAGAAGAAGATTAAAAAAGCAGTCTCAAAGAAAAATCGGGATCTT
GCTGAACGCCTGTTAACTCGAAAACCCACTTATACTCTTGACATGCTTATTCGAGAAAGG
TACCCTAAATTCATTGATGCACTTAGAGATTTGGATGACTGCCTTAGTATGGTGCACTTG
TTTGCTGCATTGCCTGCTGTAGAAAGAGAGAAGATACCGGTAAACCGTGTCCATAACTGT
CGAAGGTTGAGCCATGAATGGCAGGCCTACGTTTCGCGCACCCACAAACTACGGAAAACA
TTTATATCAGTGAAAGGAATATATTACCAGGCAGAAATAGATGGGCAAAAAATCACTTGG
TTAACTCCACATGCATTGCAACAAGTACTTCCTGCAGACGTTGACTACAACATCATGCTG
ACTTTCTTGGAATTTTATGAGACACTCCTAGCTTTTGTTAATTTCAAGCTTTACCATTCA
ATAAATGTGAAATATCCTCCCATTCTTGATTCTCGGCTTGAGGCTTTAGCTGCTGATCTT
TATGCATTATCTAGGTTCTTCGATAGCAGAGCCTCCATGACAGAGTCAAAAGCTGCTAGC
ATCTCTGAATCTGATGTGAGTAAGGACCTGGGAGAGGGGACAAACTATGATGAATCTGAA
CTTAGACTGGCACAACTTCAACAACAGCTTCCTTCCAATGAACCAGGTGCCTTAATGCAC
CTTGTTCAAAATGCTGCAGAAAGTGATGAAGATGATTCCGAAACCAGGAAATGCAAAGCA
CTTTTCAAGGATGTCAAGTTCTTCTTGAGTCGTGAGGTTCCGAGAGAGTCACTGTTGTTT
GTTATCCCTGCTTTTGGTGGTATCGTTTCTTGGGATGGAGAAGGGGCACCATTTAAAGAG
ACTGACCAGAGTATTACTCATCAGATTGTTGACCGCCCCACTCAGGGCCACAAATTCCTT
TCCCGAGAATATGTCCAGCCACAGTGGATTTATGATTGTATTAATGCACGCATCCTTTTA
CCAGTTGATGAATATGTTGTGGGAAGGATTCCTCCACCACACTTGTCACCTTTTGTTGAT
AATGAGGCCGAAGGATATGTTCCTGAATATGCAGAGACCATCAAGCGTCTACAGGCAGCT
GCAAGACAAGAAGTGCTTCCAATGCCAGGGGTGGGCAAAGAGGATTTGGACGACCCTCAA
AATTTACTTGTGGAAGGCGTCATTGACCGGGCTGAAGCTATTGAAGCTGCCGAGAAAAAG
CGCAAGATGTCAATTCTTCAGAAGCAGTATCATGATGAACTGAAAAAAGAACTTGGAAGT
ACCCAAATTTCTGCTGCTTCAGGTGGGAATAAGGATAGTGTTTCTGAGGACATTGATACT
GGAGGAGATTCTCTTCCAGATATAAGTCAAATTTCTAAGGACGCAGACAGCATGTCCGAT
ATTCTCATGCCTCGTAAAAAGAGGAAGCTACTAGATGCTATGAAGATGGGCAAAGAGAAG
AAACAAGCTAATGTTGACCGTTTGAAGCAGAGGAACAGAATGATTAAAGAAGGAAAAATA
TCAGAGAAATAA

Peptide Sequence

PEP ID

XP_016433662.1
PEP Infomation

PREDICTED: pescadillo homolog [Nicotiana tabacum]
Sequence

MPKHYRPAGKKKEGNAARYITKSQAVKYLQVSLSLFRKLCILKGIFPREPKKKVKGNHRT
YYHTKDILFLKHEPLLEKFREMRAYEKKIKKAVSKKNRDLAERLLTRKPTYTLDMLIRER
YPKFIDALRDLDDCLSMVHLFAALPAVEREKIPVNRVHNCRRLSHEWQAYVSRTHKLRKT
FISVKGIYYQAEIDGQKITWLTPHALQQVLPADVDYNIMLTFLEFYETLLAFVNFKLYHS
INVKYPPILDSRLEALAADLYALSRFFDSRASMTESKAASISESDVSKDLGEGTNYDESE
LRLAQLQQQLPSNEPGALMHLVQNAAESDEDDSETRKCKALFKDVKFFLSREVPRESLLF
VIPAFGGIVSWDGEGAPFKETDQSITHQIVDRPTQGHKFLSREYVQPQWIYDCINARILL
PVDEYVVGRIPPPHLSPFVDNEAEGYVPEYAETIKRLQAAARQEVLPMPGVGKEDLDDPQ
NLLVEGVIDRAEAIEAAEKKRKMSILQKQYHDELKKELGSTQISAASGGNKDSVSEDIDT
GGDSLPDISQISKDADSMSDILMPRKKRKLLDAMKMGKEKKQANVDRLKQRNRMIKEGKI
SEK

Transcript Sequence

Gene sequence data has not been registered.